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PDBsum entry 4acb
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Ligand/metal interactions
PDB id
4acb
Ligand highlighted
GDP
Ligands
GNP
GNP 1469(A)
GDP
GDP 1469(B)
SO4
×6
SO4 1471(B)
SO4 1472(B)
SO4 1471(C)
SO4 1472(C)
SO4 1473(C)
SO4 1481(C)
DXC
×7
DXC 1473(B)
DXC 1475(C)
DXC 1476(C)
DXC 1477(C)
DXC 1478(C)
DXC 1479(C)
DXC 1480(C)
5GP
5GP 1474(B)
Metals
_MG
×2
MG 1470(A)
Ligand
GDP
-
Guanosine-5'-Diphosphate
Formula:
C
10
H
15
N
5
O
11
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GDP 1469(B)
28
28
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GDP 1469(B)
O3B: O1B
|
O1B: O2B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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LIGPLOT
of interactions involving ligand GDP
List of
interactions
GDP 1469(B)
_MG
×2
