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PDBsum entry 1vf5
Go to PDB code:
Ligand/metal interactions
PDB id
1vf5
2 instances of ligand highlighted
TDS
Ligands
HEM
×8
HEM 301(A)
HEM 302(A)
HEM 303(A)
HEM 301(C)
TDS
×2
TDS 304(A)
PL9
×2
PL9 305(A)
OPC
×4
OPC 307(B)
OPC 306(D)
CLA
×2
CLA 201(B)
FES
×2
FES 200(D)
BCR
×2
BCR 101(E)
Ligand
TDS
-
8-Hydroxy-5,7-Dimethoxy-3-Methyl-2-Tridecyl-4h-Chromen- 4-
One
[Tridecyl-Stigmatellin]
Formula:
C
25
H
38
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
TDS 304(A)
30
30
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's reactant plastoquinol with similarity 40.62%
LIGPLOT
of interactions involving ligand TDS
List of
interactions
TDS 304(A)
(also representing equivalent ligand TDS 1304(N) )
