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PDBsum entry 1v3l
Go to PDB code:
Ligand/metal interactions
PDB id
1v3l
Ligand highlighted
GLC-GLD
Ligands
GAL-GLD
GAL 1(C) to GLD 2(C)
GLC-GLD
GLC 1(D) to GLD 2(D)
GLC-ACI
×2
GLC 701(A) to ACI 702(A)
Metals
_CA
×4
CA 688(A)
CA 687(A)
Ligand
GLC-GLD
GLD
-
4,6-Dideoxy-Alpha-D-Xylo-Hexopyranose [4,6-Dideoxyglucose; 4,6-Dideoxy-Alpha-D-Xylo-Hexose; 4, 6-Dideoxy-D-Xylo-Hexose; 4,6-Dideoxy-Xylo-Hexose]
Formula:
C
6
H
12
O
4
GLC
-
Alpha-D-Glucopyranose [Alpha-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLC 1(D)
12
12
0
0
Complete
Chiral checks - OK
GLD 2(D)
10
10
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLC-GLD
List of
interactions
GLC 1(D) to GLD 2(D)
_CA
×4
