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PDBsum entry 1qdb
Go to PDB code:
Ligand/metal interactions
PDB id
1qdb
15 instances of ligand highlighted
HEC
Ligands
SO4
×9
SO4 1501(A)
SO4 1504(A)
SO4 1506(A)
HEC
×15
HEC 515(A)
HEC 516(A)
HEC 517(A)
HEC 518(A)
HEC 519(A)
Metals
_CA
×3
CA 520(A)
Ligand
HEC
-
Heme c
Formula:
C
34
H
34
FeN
4
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
HEC 515(A)
43
43
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
HEC 515(A)
O2A: O1A
|
O1A: O2A
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's cofactor heme b with similarity 95.45%
LIGPLOT
of interactions involving ligand HEC
List of
interactions
HEC 515(A)
also representing 2 other equivalent ligands:
HEC 515(B)
HEC 515(C)
_CA
×3
