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PDBsum entry 1n2e
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Ligand/metal interactions
PDB id
1n2e
2 instances of ligand highlighted
APC
Ligands
SO4
×2
SO4 602(A)
APC
×2
APC 801(A)
PAF
PAF 1001(A)
GOL
×2
GOL 502(A)
GOL 501(B)
EOH
×4
EOH 704(A)
EOH 701(B)
EOH 702(B)
EOH 703(B)
Metals
_MG
MG 901(B)
Ligand
APC
-
Diphosphomethylphosphonic acid adenosyl ester
[Alpha,Beta-Methyleneadenosine-5'-Triphosphate]
Formula:
C
11
H
18
N
5
O
12
P
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
APC 801(A)
31
31
0
0
0
0
0
1
0
0
Advanced Analysis
Residue
Name Mismatches
Count
APC 801(A)
O3G: O1G
|
O1G: O3G
|
O2B: O1B
|
O1B: O2B
|
O2A: O1A...
6
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product AMP with similarity 68.75%
LIGPLOT
of interactions involving ligand APC
List of
interactions
APC 801(A)
(also representing equivalent ligand APC 802(B) )
_MG
