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PDBsum entry 1md2
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Ligand/metal interactions
PDB id
1md2
Ligand highlighted
CYN-233
Ligands
233-233-_SQ
×2
233 2201(D) to SQ 2202(D)
CYN-233
CYN 1208(F) to 233 1207(F)
Ligand
CYN-233
233
-
[5-(3,4,5-Trihydroxy-6-Hydroxymethyl-Tetrahydro-Pyran- 2-Ylcarbamoyl)-Pentyl]-Carbamic acid methyl ester [Bmsc-0013]
Formula:
C
14
H
26
N
2
O
8
CYN
-
Cyanide ion
Formula:
CN
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
233 1207(F)
24
24
0
0
Complete
Chiral checks - OK
CYN 1208(F)
2
-
-
-
Residue too small to validate
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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LIGPLOT
of interactions involving ligand CYN-233
List of
interactions
CYN 1208(F) to 233 1207(F)
