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PDBsum entry 6kpy
Go to PDB code:
Ligand/metal interactions
PDB id
6kpy
NAG-NAG
Ligands
NAG-NAG
×4
NAG 1(F) to NAG 2(F)
NAG 1(H) to NAG 2(H)
1AT
×2
1AT 1104(A)
F9U
×2
F9U 1105(A)
NAG
×2
NAG 1005(B)
CLR
×2
CLR 101(G)
Metals
_MG
×4
MG 1101(A)
MG 1103(A)
_NA
×2
NA 1102(A)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(H)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(H)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(H) to NAG 2(H)
(also representing equivalent ligand NAG 1(J) to NAG 2(J) )
_MG
×4
_NA
×2
