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PDBsum entry 5f1v
Go to PDB code:
Ligand/metal interactions
PDB id
5f1v
4 instances of ligand highlighted
3VN
Ligands
3VN
×4
3VN 301(A)
3VN 304(A)
PGE
×3
PGE 302(A)
EDO
×9
EDO 303(A)
EDO 302(B)
EDO 303(B)
EDO 304(B)
EDO 301(C)
EDO 302(C)
EDO 302(D)
EDO 303(D)
EDO 304(D)
GOL
GOL 303(C)
Ligand
3VN
-
(2r,5r)-2,5-Diamino-2,5-Bis(4-Aminobutyl)hexanedioic acid
[Bis-Lysine]
Formula:
C
14
H
30
N
4
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
3VN 304(A)
22
22
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
3VN 304(A)
O05: O04
|
O04: O05
|
O22: O21
|
O21: O22
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand 3VN
List of
interactions
3VN 304(A)
(also representing equivalent ligand 3VN 305(B) )
