PDBsum entry 1zhs

Ligand/metal interactions

PDB id

1zhs


	16 instances of ligand highlighted
	NAG-NAG-BMA-MAN- MAN

Ligands

NAG-NAG-BMA-MAN-
MAN ×16

NAG 1(I) to MAN 5(I)

NAG 1(J) to MAN 5(J)

EDO ×26

PO4 ×2

Ligand NAG-NAG-BMA-MAN-MAN

NAG - 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine] Formula: C₈H₁₅NO₆

BMA - Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose] Formula: C₆H₁₂O₆

MAN - Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose] Formula: C₆H₁₂O₆

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
NAG 1(J)	15	15	0	0	Complete		Chiral checks - OK
NAG 2(J)	15	15	1	0	Complete		Chiral checks - OK
BMA 3(J)	12	12	1	0	Complete		Chiral checks - OK
MAN 4(J)	12	12	1	0	Complete		Chiral checks - OK
MAN 5(J)	12	12	1	0	Complete		Chiral checks - OK

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

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LIGPLOT of interactions involving ligand NAG-NAG-BMA-MAN-MAN

List of
interactions

NAG 1(J) to MAN 5(J)

also representing 7 other equivalent ligands:
NAG 1(L) to MAN 5(L)
NAG 1(N) to MAN 5(N)
NAG 1(P) to MAN 5(P)
NAG 1(R) to MAN 5(R)
NAG 1(T) to MAN 5(T)
NAG 1(V) to MAN 5(V)
NAG 1(X) to MAN 5(X)