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PDBsum entry 1gzm
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Ligand/metal interactions PDB id
1gzm
4 instances of ligand highlighted
NAG-NAG-BMA
Ligands
NAG-NAG-BMA ×4
NAG 1(C) to BMA 3(C)
NAG 1(D) to BMA 3(D)
RET ×2
RET 1332(A)
PLM ×4
PLM 1333(A)
PLM 1334(A)
PEF ×2
PEF 1341(A)
LDA ×3
LDA 1342(A)
C8E ×12
C8E 1343(A)
C8E 1344(A)
C8E 1345(A)
C8E 1346(A)
C8E 1348(A)
C8E 1340(B)
Metals
_ZN ×2
ZN 1349(A)
  
Ligand NAG-NAG-BMA

NAG - 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine] Formula: C8H15NO6
BMA - Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose] Formula: C6H12O6
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
NAG 1(D) 15 15 1 1 Complete Chiral checks - OK
NAG 2(D) 15 15 1 0 Complete Chiral checks - OK
BMA 3(D) 12 12 1 0 Complete Chiral checks - OK
Additional Information
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LIGPLOT of interactions involving ligand NAG-NAG-BMA

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List of
interactions
 

NAG 1(D) to BMA 3(D)

(also representing equivalent ligand NAG 1(F) to BMA 3(F) )
  
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