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PDBsum entry 7neh
Go to PDB code:
Ligand/metal interactions
PDB id
7neh
Ligand highlighted
NAG-NAG-FUC
Ligands
NAG-NAG-FUC
NAG 1(A) to FUC 3(A)
EDO
×19
EDO 401(H)
EDO 402(H)
EDO 403(H)
EDO 405(H)
EDO 406(H)
EDO 407(H)
EDO 301(L)
EDO 302(L)
EDO 303(L)
EDO 306(L)
EDO 307(L)
EDO 308(L)
EDO 901(E)
EDO 902(E)
EDO 903(E)
EDO 904(E)
EDO 906(E)
EDO 907(E)
EDO 908(E)
NO3
×3
NO3 404(H)
NO3 304(L)
NO3 905(E)
PEG
PEG 305(L)
SO4
SO4 309(L)
Metals
_CL
CL 909(E)
Ligand
NAG-NAG-FUC
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
FUC
-
Alpha-L-Fucopyranose [Alpha-L-Fucose; 6-Deoxy-Alpha-L-Galactopyranose; l- Fucose; fucose]
Formula:
C
6
H
12
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(A)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(A)
15
15
1
0
Complete
Chiral checks - OK
FUC 3(A)
11
11
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG-FUC
List of
interactions
NAG 1(A) to FUC 3(A)
_CL
