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PDBsum entry 7dyn
Go to PDB code:
Ligand/metal interactions
PDB id
7dyn
Ligand highlighted
ARG-ARG-PHE-SEP-
ARG-SEP-PRO-ILE-
ARG-ARG
Ligands
ARG-ARG-PHE-SEP-
ARG-SEP-PRO-ILE-
ARG-ARG
ARG 1(C) to ARG 10(C)
Ligand
ARG-ARG-PHE-SEP-ARG-SEP-PRO-ILE-ARG-ARG
-
Phosphoserine
[Phosphonoserine]
Formula:
C
3
H
8
NO
6
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ARG 1(C)
12
12
1
1
Complete
Chiral checks - OK
ARG 2(C)
12
12
1
1
Complete
Chiral checks - OK
PHE 3(C)
12
12
1
1
Complete
Chiral checks - OK
SEP 4(C)
11
11
1
1
Complete
Chiral checks - OK
ARG 5(C)
12
12
1
1
Complete
Chiral checks - OK
SEP 6(C)
11
11
1
1
Complete
Chiral checks - OK
PRO 7(C)
8
8
1
1
Complete
Chiral checks - OK
ILE 8(C)
9
9
1
1
Complete
Chiral checks - OK
ARG 9(C)
12
12
1
1
Complete
Chiral checks - OK
ARG 10(C)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ARG 1(C)
-
0
ARG 2(C)
-
0
PHE 3(C)
-
0
SEP 4(C)
O: OXT
|
O3P: O1P
|
O1P: O3P
3
ARG 5(C)
-
0
SEP 6(C)
-
0
PRO 7(C)
-
0
ILE 8(C)
-
0
ARG 9(C)
-
0
ARG 10(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand ARG-ARG-PHE-SEP-ARG-SEP-PRO-ILE-ARG-ARG
List of
interactions
ARG 1(C) to ARG 10(C)
