Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 6vb2
Go to PDB code:
Ligand/metal interactions
PDB id
6vb2
Ligand highlighted
GLU-LEU-ARG-ALA-
ARG-GLN-GLU-CYS-
TYR
Ligands
GLU-LEU-ARG-ALA-
ARG-GLN-GLU-CYS-
TYR
GLU 1(C) to TYR 9(C)
GOL
×2
GOL 302(A)
GOL 101(B)
ACT
×2
ACT 303(A)
ACT 102(B)
EDO
×5
EDO 304(A)
EDO 305(A)
EDO 306(A)
EDO 307(A)
EDO 308(A)
Metals
_NA
NA 301(A)
Ligand
GLU-LEU-ARG-ALA-ARG-GLN-GLU-CYS-TYR
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLU 1(C)
10
10
1
1
Complete
Chiral checks - OK
LEU 2(C)
9
9
1
1
Complete
Chiral checks - OK
ARG 3(C)
12
12
1
1
Complete
Chiral checks - OK
ALA 4(C)
6
-
-
-
Residue too small to validate
ARG 5(C)
12
12
1
1
Complete
Chiral checks - OK
GLN 6(C)
10
10
1
1
Complete
Chiral checks - OK
GLU 7(C)
10
10
1
1
Complete
Chiral checks - OK
CYS 8(C)
7
7
1
1
Complete
Chiral checks - OK
TYR 9(C)
13
13
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLU 1(C)
O: OXT
1
LEU 2(C)
O: OXT
1
ARG 3(C)
-
0
ALA 4(C)
-
0
ARG 5(C)
O: OXT
1
GLN 6(C)
-
0
GLU 7(C)
-
0
CYS 8(C)
-
0
TYR 9(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
LIGPLOT
of interactions involving ligand GLU-LEU-ARG-ALA-ARG-GLN-GLU-CYS-TYR
List of
interactions
GLU 1(C) to TYR 9(C)
_NA
