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PDBsum entry 6rs6
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Ligand/metal interactions
PDB id
6rs6
Ligand highlighted
NAG-NAG-BMA
Ligands
NAG-NAG-BMA
NAG 1(B) to BMA 3(B)
MAN
MAN 301(A)
PEG
PEG 304(A)
GLY
×2
GLY 305(A)
GLY 306(A)
SER
SER 307(A)
Metals
_CL
×2
CL 302(A)
CL 303(A)
Ligand
NAG-NAG-BMA
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
BMA
-
Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(B)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(B)
15
15
1
0
Complete
Chiral checks - OK
BMA 3(B)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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LIGPLOT
of interactions involving ligand NAG-NAG-BMA
List of
interactions
NAG 1(B) to BMA 3(B)
_CL
×2
