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PDBsum entry 6pw6
Go to PDB code:
Ligand/metal interactions
PDB id
6pw6
24 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG
×24
NAG 1(J) to NAG 2(J)
NAG 1(K) to NAG 2(K)
NAG 1(M) to NAG 2(M)
NAG 1(N) to NAG 2(N)
NAG 1(O) to NAG 2(O)
NAG 1(P) to NAG 2(P)
NAG 1(Q) to NAG 2(Q)
NAG 1(S) to NAG 2(S)
NAG-NAG-BMA-MAN
×6
NAG 1(L) to MAN 4(L)
NAG 1(R) to MAN 4(R)
NAG
×36
NAG 605(A)
NAG 610(A)
NAG 611(A)
NAG 612(A)
NAG 619(A)
NAG 620(A)
NAG 625(A)
NAG 630(A)
NAG 701(B)
NAG 702(B)
NAG 703(B)
NAG 704(B)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(J)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(J)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(J) to NAG 2(J)
also representing 2 other equivalent ligands:
NAG 1(T) to NAG 2(T)
NAG 1(d) to NAG 2(d)
