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PDBsum entry 6plt
Go to PDB code:
Ligand/metal interactions
PDB id
6plt
5 instances of ligand highlighted
NAG-NAG
Ligands
NAG-NAG
×5
NAG 1(F) to NAG 2(F)
UNL
×45
UNL 503(A)
UNL 504(A)
UNL 505(A)
UNL 506(A)
UNL 507(A)
UNL 509(A)
UNL 510(A)
UNL 511(A)
UNL 512(A)
UNL 510(E)
UNL 510(D)
UNL 510(C)
TAU
×5
TAU 508(A)
TAU 501(D)
TAU 501(C)
Ligand
NAG-NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose
[N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-
Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-
Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(F)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(F)
15
15
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG
List of
interactions
NAG 1(F) to NAG 2(F)
also representing 4 other equivalent ligands:
NAG 1(G) to NAG 2(G)
NAG 1(H) to NAG 2(H)
NAG 1(I) to NAG 2(I)
NAG 1(J) to NAG 2(J)
