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PDBsum entry 6o9c
Go to PDB code:
Ligand/metal interactions
PDB id
6o9c
Ligand highlighted
THR-THR-ALA-PRO-
PHE-LEU-SER-GLY-
LYS
Ligands
THR-THR-ALA-PRO-
PHE-LEU-SER-GLY-
LYS
THR 1(C) to LYS 9(C)
MES
×2
MES 301(A)
MES 201(B)
SO4
×10
SO4 302(A)
SO4 303(A)
SO4 304(A)
SO4 305(A)
SO4 306(A)
SO4 307(A)
SO4 308(A)
SO4 202(B)
SO4 203(B)
SO4 204(B)
PEG
×2
PEG 205(B)
PEG 206(B)
Ligand
THR-THR-ALA-PRO-PHE-LEU-SER-GLY-LYS
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
THR 1(C)
8
8
1
1
0
0
0
0
0
0
THR 2(C)
8
8
1
1
0
0
0
0
0
0
ALA 3(C)
6
-
-
-
-
-
-
-
-
-
PRO 4(C)
8
8
1
1
0
0
0
0
0
0
PHE 5(C)
12
12
1
1
0
0
0
0
0
0
LEU 6(C)
9
9
1
1
0
0
0
0
0
0
SER 7(C)
7
6
0
0
1
0
-
-
-
-
GLY 8(C)
5
-
-
-
-
-
-
-
-
-
LYS 9(C)
10
10
0
0
0
0
0
0
0
0
Advanced Analysis
Residue
Name Mismatches
Count
THR 1(C)
-
0
THR 2(C)
-
0
ALA 3(C)
-
0
PRO 4(C)
-
0
PHE 5(C)
O: OXT
1
LEU 6(C)
O: OXT
1
SER 7(C)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
GLY 8(C)
-
0
LYS 9(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
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LIGPLOT
of interactions involving ligand THR-THR-ALA-PRO-PHE-LEU-SER-GLY-LYS
List of
interactions
THR 1(C) to LYS 9(C)
