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PDBsum entry 5zii
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Ligand/metal interactions
PDB id
5zii
Ligand highlighted
XYP-XYP-XYP
Ligands
XYP-XYP-XYP
XYP 1(B) to XYP 3(B)
Metals
IOD
×4
IOD 207(A)
IOD 204(A)
IOD 205(A)
IOD 206(A)
Ligand
XYP-XYP-XYP
-
Beta-D-Xylopyranose
[Beta-D-Xylose; d-Xylose; xylose]
Formula:
C
5
H
10
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
XYP 1(B)
10
10
0
0
0
0
0
0
1
0
XYP 2(B)
10
10
1
0
0
0
0
0
0
0
XYP 3(B)
10
10
1
0
0
0
0
0
0
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand XYP-XYP-XYP
List of
interactions
XYP 1(B) to XYP 3(B)
IOD
×4
