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PDBsum entry 5e6i
Go to PDB code:
Ligand/metal interactions
PDB id
5e6i
4 instances of ligand highlighted
GLY-ILE-LEU-GLY-
PHE-VAL-PHE-THR-
LEU
Ligands
GLY-ILE-LEU-GLY-
PHE-VAL-PHE-THR-
LEU
×4
GLY 1(K) to LEU 9(K)
GLY 1(O) to LEU 9(O)
Ligand
GLY-ILE-LEU-GLY-PHE-VAL-PHE-THR-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLY 1(K)
5
-
-
-
-
-
-
-
-
-
ILE 2(K)
9
9
1
1
0
0
0
0
0
0
LEU 3(K)
9
9
1
1
0
0
0
0
0
0
GLY 4(K)
5
-
-
-
-
-
-
-
-
-
PHE 5(K)
12
12
1
1
0
0
0
0
0
0
VAL 6(K)
8
8
1
1
0
0
0
0
0
0
PHE 7(K)
12
12
1
1
0
0
0
0
0
0
THR 8(K)
8
8
1
1
0
0
0
0
0
0
LEU 9(K)
9
8
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
GLY 1(K)
-
0
ILE 2(K)
-
0
LEU 3(K)
O: OXT
1
GLY 4(K)
-
0
PHE 5(K)
O: OXT
1
VAL 6(K)
-
0
PHE 7(K)
O: OXT
1
THR 8(K)
-
0
LEU 9(K)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLY-ILE-LEU-GLY-PHE-VAL-PHE-THR-LEU
List of
interactions
GLY 1(K) to LEU 9(K)
also representing 2 other equivalent ligands:
GLY 1(E) to LEU 9(E)
GLY 1(T) to LEU 9(T)
