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PDBsum entry 5drv
Go to PDB code:
Ligand/metal interactions
PDB id
5drv
Ligand highlighted
LEU-THR-PHE-GLY-
ASP-PHE-ASP-GLU
Ligands
LEU-THR-PHE-GLY-
ASP-PHE-ASP-GLU
LEU 1(B) to GLU 8(B)
Ligand
LEU-THR-PHE-GLY-ASP-PHE-ASP-GLU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
LEU 1(B)
9
9
1
1
Complete
Chiral checks - OK
THR 2(B)
8
8
1
1
Complete
Chiral checks - OK
PHE 3(B)
12
12
1
1
Complete
Chiral checks - OK
GLY 4(B)
5
-
-
-
Residue too small to validate
ASP 5(B)
9
9
1
1
Complete
Chiral checks - OK
PHE 6(B)
12
12
1
1
Complete
Chiral checks - OK
ASP 7(B)
9
9
1
1
Complete
Chiral checks - OK
GLU 8(B)
10
10
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
LEU 1(B)
-
0
THR 2(B)
-
0
PHE 3(B)
O: OXT
1
GLY 4(B)
-
0
ASP 5(B)
-
0
PHE 6(B)
O: OXT
1
ASP 7(B)
-
0
GLU 8(B)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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of interactions involving ligand LEU-THR-PHE-GLY-ASP-PHE-ASP-GLU
List of
interactions
LEU 1(B) to GLU 8(B)
