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PDBsum entry 4zdp

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Top Page protein dna_rna ligands Protein-protein interface(s) links
Ligand/metal interactions PDB id
4zdp
4 instances of ligand highlighted
PLR
Ligands
PLR ×4
PLR 1001(A)
PO4 ×4
PO4 1002(A)
  
Ligand PLR - (5-Hydroxy-4,6-Dimethylpyridin-3-
Yl)methyl dihydrogen phosphate
[4'-Deoxypyridoxine phosphate]
Formula: C8H12NO5P
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
PLR 1001(A) 15 15 0 0 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
PLR 1001(A) O3P: O1P|O1P: O2P 2
Additional Information
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Ligand matches this enzyme's cofactor pyridoxal 5'-phosphate with similarity 93.75%


LIGPLOT of interactions involving ligand PLR

JSmol




List of
interactions
 


PLR 1001(A)

also representing 3 other equivalent ligands:
PLR 1001(B)
PLR 1001(C)
PLR 1001(D)
  
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