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PDBsum entry 4z8m
Go to PDB code:
Ligand/metal interactions
PDB id
4z8m
Ligand highlighted
HIS-GLY-PRO-GLU-
GLU-ASN-GLU-TYR-
LYS
Ligands
HIS-GLY-PRO-GLU-
GLU-ASN-GLU-TYR-
LYS
HIS 601(C) to LYS 609(C)
GLY-PRO-GLU-GLU-
ASN-GLU-TYR
GLY 602(D) to TYR 608(D)
Ligand
HIS-GLY-PRO-GLU-GLU-ASN-GLU-TYR-LYS
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
HIS 601(C)
11
6
1
1
5
1
-
-
-
-
GLY 602(C)
5
-
-
-
-
-
-
-
-
-
PRO 603(C)
8
8
1
1
0
0
0
0
0
0
GLU 604(C)
10
6
1
1
4
0
-
-
-
-
GLU 605(C)
10
10
1
1
0
0
0
0
0
0
ASN 606(C)
9
9
1
1
0
0
0
0
0
0
GLU 607(C)
10
10
1
1
0
0
0
0
0
0
TYR 608(C)
13
13
1
1
0
0
0
0
0
0
LYS 609(C)
10
9
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
HIS 601(C)
-
0
GLY 602(C)
-
0
PRO 603(C)
-
0
GLU 604(C)
-
0
GLU 605(C)
-
0
ASN 606(C)
-
0
GLU 607(C)
OE2: OE1
|
OE1: OE2
2
TYR 608(C)
-
0
LYS 609(C)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
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Validator
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LIGPLOT
of interactions involving ligand HIS-GLY-PRO-GLU-GLU-ASN-GLU-TYR-LYS
List of
interactions
HIS 601(C) to LYS 609(C)
