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PDBsum entry 4y8h
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Ligand/metal interactions PDB id
4y8h
6 instances of ligand highlighted
AZI-ACE-ALA-PRO-
ALA-05W
Ligands
AZI-ACE-ALA-PRO-
ALA-05W ×6
AZI 1(c) to 05W 6(c)
AZI 1(d) to 05W 6(d)
AZI 1(e) to 05W 6(e)
MES ×2
MES 302(K)
Metals
_CL ×4
CL 302(G)
CL 203(N)
_MG ×8
MG 302(I)
MG 301(L)
MG 301(G)
MG 301(I)
MG 201(N)
MG 202(N)
  
Ligand AZI-ACE-ALA-PRO-ALA-05W

AZI - Azide ion Formula: N3
ACE - Acetyl group Formula: C2H4O
05W - (2r,3s,4s)-4-Azanyl-2,6-Dimethyl-Heptane-1,3-Diol Formula: C9H21NO2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
AZI 1(c) 3 - - - Residue too small to validate
ACE 2(c) 3 - - - Residue too small to validate
ALA 3(c) 6 - - - Residue too small to validate
PRO 4(c) 8 8 1 1 Complete Chiral checks - OK
ALA 5(c) 6 - - - Residue too small to validate
05W 6(c) 12 12 0 0 Complete Chiral checks - OK
Additional Information
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LIGPLOT of interactions involving ligand AZI-ACE-ALA-PRO-ALA-05W

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List of
interactions
 

AZI 1(c) to 05W 6(c)

(also representing equivalent ligand AZI 1(f) to 05W 6(f) )
  
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