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PDBsum entry 4x05
Go to PDB code:
Ligand/metal interactions
PDB id
4x05
4 instances of ligand highlighted
GLA-FUC-GLA
Ligands
GLA-FUC-GLA
×4
GLA 1(E) to GLA 3(E)
Ligand
GLA-FUC-GLA
GLA
-
Alpha-D-Galactopyranose [Alpha-D-Galactose; d-Galactose; galactose; alpha d- Galactose]
Formula:
C
6
H
12
O
6
FUC
-
Alpha-L-Fucopyranose [Alpha-L-Fucose; 6-Deoxy-Alpha-L-Galactopyranose; l- Fucose; fucose]
Formula:
C
6
H
12
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLA 1(E)
12
12
0
0
Complete
Chiral checks - OK
FUC 2(E)
11
11
1
0
Complete
Chiral checks - OK
GLA 3(E)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLA-FUC-GLA
List of
interactions
GLA 1(E) to GLA 3(E)
also representing 3 other equivalent ligands:
GLA 1(F) to GLA 3(F)
GLA 1(G) to GLA 3(G)
GLA 1(H) to GLA 3(H)
