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PDBsum entry 4pxf
Go to PDB code:
Ligand/metal interactions
PDB id
4pxf
Ligand highlighted
ASP-ILE-ASP-VAL-
MET-GLY-LEU
Ligands
ASP-ILE-ASP-VAL-
MET-GLY-LEU
ASP 71(B) to LEU 77(B)
NAG-NAG-BMA-MAN
NAG 1(C) to MAN 4(C)
GLC-GLC
GLC 1(D) to GLC 2(D)
BOG
×3
BOG 405(A)
BOG 406(A)
BOG 407(A)
PLM
PLM 408(A)
SO4
SO4 409(A)
ACT
ACT 410(A)
Ligand
ASP-ILE-ASP-VAL-MET-GLY-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ASP 71(B)
9
9
1
1
0
0
0
0
0
0
ILE 72(B)
9
9
1
1
0
0
0
0
0
0
ASP 73(B)
9
9
1
1
0
0
0
0
0
0
VAL 74(B)
8
8
1
1
0
0
0
0
0
0
MET 75(B)
9
9
1
1
0
0
0
0
0
0
GLY 76(B)
5
-
-
-
-
-
-
-
-
-
LEU 77(B)
9
8
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
ASP 71(B)
OD2: OD1
|
OD1: OD2
|
O: OXT
3
ILE 72(B)
-
0
ASP 73(B)
-
0
VAL 74(B)
O: OXT
1
MET 75(B)
O: OXT
1
GLY 76(B)
-
0
LEU 77(B)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand ASP-ILE-ASP-VAL-MET-GLY-LEU
List of
interactions
ASP 71(B) to LEU 77(B)
