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PDBsum entry 4n4w
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Ligand/metal interactions
PDB id
4n4w
Ligand highlighted
NAG-NAG-BMA-MAN
Ligands
NAG-NAG-BMA-MAN
NAG 1(B) to MAN 4(B)
SNT
SNT 605(A)
OLC
×2
OLC 608(A)
OLC 609(A)
PEG
PEG 610(A)
PG4
PG4 611(A)
Metals
_ZN
×2
ZN 606(A)
ZN 607(A)
Ligand
NAG-NAG-BMA-MAN
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
BMA
-
Beta-D-Mannopyranose [Beta-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
MAN
-
Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(B)
15
14
0
0
1
0
-
-
-
-
NAG 2(B)
15
15
1
0
0
0
0
0
0
0
BMA 3(B)
12
12
1
0
0
0
0
0
0
0
MAN 4(B)
12
12
1
0
0
0
0
0
0
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG-BMA-MAN
List of
interactions
NAG 1(B) to MAN 4(B)
_ZN
×2
