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PDBsum entry 4m6e
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Ligand/metal interactions PDB id
4m6e
DPN-PRO-PHE-DPN-
ASN-GLN-TYR-VAL-
ORN-LEU

Ligands
DPN-PRO-PHE-DPN-
ASN-GLN-TYR-VAL-
ORN-LEU
DPN 1(A) to LEU 10(A)
MPD
MPD 101(A)
MOH ×3
MOH 102(A)
MOH 103(A)
MOH 104(A)
  
Ligand DPN-PRO-PHE-DPN-ASN-GLN-TYR-VAL-ORN-LEU

DPN - D-Phenylalanine Formula: C9H11NO2
ORN - L-Ornithine Formula: C5H12N2O2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
DPN 1(A) 12 12 1 1 Complete Chiral checks - OK
PRO 2(A) 8 8 1 1 Complete Chiral checks - OK
PHE 3(A) 12 12 1 1 Complete Chiral checks - OK
DPN 4(A) 12 12 1 1 Complete Chiral checks - OK
ASN 5(A) 9 9 1 1 Complete Chiral checks - OK
GLN 6(A) 10 10 1 1 Complete Chiral checks - OK
TYR 7(A) 13 13 1 1 Complete Chiral checks - OK
VAL 8(A) 8 8 1 1 Complete Chiral checks - OK
ORN 9(A) 9 9 1 1 Complete Chiral checks - OK
LEU 10(A) 9 9 1 1 Complete Chiral checks - OK
Advanced Analysis
Residue Name Mismatches Count
DPN 1(A) - 0
PRO 2(A) - 0
PHE 3(A) O: OXT 1
DPN 4(A) O: OXT 1
ASN 5(A) O: OXT 1
GLN 6(A) - 0
TYR 7(A) - 0
VAL 8(A) - 0
ORN 9(A) - 0
LEU 10(A) O: OXT 1
Additional Information
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  JSmol

LIGPLOT of interactions involving ligand DPN-PRO-PHE-DPN-ASN-GLN-TYR-VAL-ORN-LEU

JSmol




List of
interactions
 

DPN 1(A) to LEU 10(A)
  
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