PDBsum entry 4l3c

Ligand/metal interactions

PDB id

4l3c


	14 instances of ligand highlighted
	TYR-LEU-LEU-MET- TRP-ILE-THR-GLN- VAL

Ligands

TYR-LEU-LEU-MET-
TRP-ILE-THR-GLN-
VAL ×14

TYR 1(m) to VAL 9(m)

GOL ×20

Metals

_CL ×38

Ligand TYR-LEU-LEU-MET-TRP-ILE-THR-GLN-VAL

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
TYR 1(m)	13	13	1	1	Complete		Chiral checks - OK
LEU 2(m)	9	9	1	1	Complete		Chiral checks - OK
LEU 3(m)	9	9	1	1	Complete		Chiral checks - OK
MET 4(m)	9	9	1	1	Complete		Chiral checks - OK
TRP 5(m)	15	15	1	1	Complete		Chiral checks - OK
ILE 6(m)	9	9	1	1	Complete		Chiral checks - OK
THR 7(m)	8	8	1	1	Complete		Chiral checks - OK
GLN 8(m)	10	10	1	1	Complete		Chiral checks - OK
VAL 9(m)	8	8	0	0	Complete		Chiral checks - OK

Advanced Analysis

Residue	Name Mismatches	Count
TYR 1(m)	-	0
LEU 2(m)	O: OXT	1
LEU 3(m)	O: OXT	1
MET 4(m)	-	0
TRP 5(m)	O: OXT	1
ILE 6(m)	O: OXT	1
THR 7(m)	-	0
GLN 8(m)	O: OXT	1
VAL 9(m)	-	0

Additional Information

Validation carried out using MotiveValidator. Nothing to show in Validator^DB.

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LIGPLOT of interactions involving ligand TYR-LEU-LEU-MET-TRP-ILE-THR-GLN-VAL

List of
interactions

TYR 1(m) to VAL 9(m)

also representing 13 other equivalent ligands:
TYR 1(i) to VAL 9(i)
TYR 1(k) to VAL 9(k)
TYR 1(f) to VAL 9(f)
TYR 1(l) to VAL 9(l)
TYR 1(h) to VAL 9(h)
TYR 1(e) to VAL 9(e)
TYR 1(n) to VAL 9(n)
TYR 1(p) to VAL 9(p)
TYR 1(o) to VAL 9(o)
TYR 1(c) to VAL 9(c)
TYR 1(g) to VAL 9(g)
TYR 1(q) to VAL 9(q)
TYR 1(j) to VAL 9(j)