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PDBsum entry 4j6e

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Ligand/metal interactions PDB id
4j6e
Ligand highlighted
UDG
Ligands
UDG
UDG 301(A)
  
Ligand UDG - (2r,3r,4r,5s,6r)-2-{[(S)-{[(S)-{[(2r,3s,4r,5r)-5-(2,4-
Dioxo-3,4-Dihydropyrimidin-1(2h)-Yl)-3,4-
Dihydroxytetrahydrofuran-2-
Yl]methoxy}(hydroxy) phosphoryl]oxy}(hydroxy)phosphoryl]
oxy}-5-Hydroxy-6- (Hydroxymethyl)-3-{[(3r)-3-
Hydroxytetradecanoyl]amino}tetrahydro-2h-Pyran-4-Yl (3r)-
3-Hydroxytetradecanoate
Formula: C43H77N3O20P2
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
UDG 301(A) 68 68 0 0 Complete Chiral checks - OK
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Ligand matches this enzyme's product lipid X with similarity 70.59%


LIGPLOT of interactions involving ligand UDG

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UDG 301(A)
  
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