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PDBsum entry 4glr
Go to PDB code:
Ligand/metal interactions
PDB id
4glr
2 instances of ligand highlighted
LYS-VAL-ALA-VAL-
VAL-ARG-TPO-PRO-
PRO-LYS
Ligands
LYS-VAL-ALA-VAL-
VAL-ARG-TPO-PRO-
PRO-LYS
×2
LYS 225(A) to LYS 234(A)
PO4
×2
PO4 301(H)
Ligand
LYS-VAL-ALA-VAL-VAL-ARG-TPO-PRO-PRO-LYS
-
Phosphothreonine
[Phosphonothreonine]
Formula:
C
4
H
10
NO
6
P
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
LYS 225(A)
10
10
1
1
0
0
0
0
0
0
VAL 226(A)
8
8
1
1
0
0
0
0
0
0
ALA 227(A)
6
-
-
-
-
-
-
-
-
-
VAL 228(A)
8
8
1
1
0
0
0
0
0
0
VAL 229(A)
8
8
1
1
0
0
0
0
0
0
ARG 230(A)
12
12
1
1
0
0
0
0
0
0
TPO 231(A)
12
12
1
1
0
0
0
0
0
0
PRO 232(A)
8
8
1
1
0
0
0
0
0
0
PRO 233(A)
8
8
1
1
0
0
0
0
0
0
LYS 234(A)
10
9
0
0
1
0
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
LYS 225(A)
-
0
VAL 226(A)
-
0
ALA 227(A)
-
0
VAL 228(A)
O: OXT
1
VAL 229(A)
-
0
ARG 230(A)
-
0
TPO 231(A)
O3P: O1P
|
O1P: O2P
2
PRO 232(A)
-
0
PRO 233(A)
-
0
LYS 234(A)
O: OXT
1
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand LYS-VAL-ALA-VAL-VAL-ARG-TPO-PRO-PRO-LYS
List of
interactions
LYS 225(A) to LYS 234(A)
(also representing equivalent ligand LYS 225(B) to LYS 234(B) )
