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PDBsum entry 4f10
Go to PDB code:
Ligand/metal interactions
PDB id
4f10
Ligand highlighted
BEM-BEM-LGU-MAW
Ligands
BEM-BEM-LGU-MAW
BEM 1(C) to MAW 4(C)
BEM-LGU
BEM 1(D) to LGU 2(D)
Ligand
BEM-BEM-LGU-MAW
BEM
-
Beta-D-Mannopyranuronic acid [Beta-D-Mannuronic acid; d-Mannuronic acid; mannuronic acid; (2s,3s,4s,5s,6r)-3,4,5,6-Tetrahydroxyoxane-2- Carboxylic acid]
Formula:
C
6
H
10
O
7
LGU
-
Alpha-L-Gulopyranuronic acid [Alpha-L-Guluronic acid; l-Guluronic acid; guluronic acid; alpha-L-Guluronate]
Formula:
C
6
H
10
O
7
MAW
-
4-Deoxy-Alpha-L-Erythro-Hex-4-Enopyranuronic acid [4-Deoxy-Alpha-L-Erythro-Hex-4-Enuronic acid; 4-Deoxy-L- Erythro-Hex-4-Enuronic acid; 4-Deoxy-Erythro-Hex-4- Enuronic acid]
Formula:
C
6
H
8
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
BEM 1(C)
13
13
0
0
Complete
Chiral checks - OK
BEM 2(C)
13
13
1
0
Complete
Chiral checks - OK
LGU 3(C)
13
13
1
0
Complete
Chiral checks - OK
MAW 4(C)
12
12
1
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
BEM 1(C)
-
0
BEM 2(C)
-
0
LGU 3(C)
O6A: O6B
|
O6B: O6A
2
MAW 4(C)
O6B: O6A
|
O6A: O6B
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand BEM-BEM-LGU-MAW
List of
interactions
BEM 1(C) to MAW 4(C)
