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PDBsum entry 4c2s
Go to PDB code:
Ligand/metal interactions
PDB id
4c2s
2 instances of ligand highlighted
DLG-FUC
Ligands
DLG-FUC
×2
DLG 1(C) to FUC 2(C)
UDP
×2
UDP 475(A)
Metals
_MN
×2
MN 406(A)
Ligand
DLG-FUC
DLG
-
Hexyl 3-Deoxy-Beta-D-Galactopyranoside [Hexyl 3-Deoxy-Beta-D-Galactopyranose; 2-Hexyloxy-6- Hydroxymethyl-Tetrahydro-Pyran-3,5-Diol; hexyl 3- Deoxy-Beta-D-Galactoside; hexyl 3-Deoxy-D-Galactoside; hexyl 3-Deoxy-Galactoside]
Formula:
C
12
H
24
O
5
FUC
-
Alpha-L-Fucopyranose [Alpha-L-Fucose; 6-Deoxy-Alpha-L-Galactopyranose; l- Fucose; fucose]
Formula:
C
6
H
12
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
DLG 1(C)
17
17
0
0
Complete
Chiral checks - OK
FUC 2(C)
11
11
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand DLG-FUC
List of
interactions
DLG 1(C) to FUC 2(C)
(also representing equivalent ligand DLG 1(D) to FUC 2(D) )
_MN
×2
