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PDBsum entry 3vug
Go to PDB code:
Ligand/metal interactions
PDB id
3vug
Ligand highlighted
PRO-LYS-ARG-PRO-
THR-THR-LEU-ASN-
LEU-PHE
Ligands
PRO-LYS-ARG-PRO-
THR-THR-LEU-ASN-
LEU-PHE
PRO 554(F) to PHE 563(F)
SO4
×4
SO4 401(A)
SO4 402(A)
SO4 403(A)
SO4 404(A)
Ligand
PRO-LYS-ARG-PRO-THR-THR-LEU-ASN-LEU-PHE
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
PRO 554(F)
8
8
1
1
Complete
Chiral checks - OK
LYS 555(F)
10
10
1
1
Complete
Chiral checks - OK
ARG 556(F)
12
12
1
1
Complete
Chiral checks - OK
PRO 557(F)
8
8
1
1
Complete
Chiral checks - OK
THR 558(F)
8
8
1
1
Complete
Chiral checks - OK
THR 559(F)
8
8
1
1
Complete
Chiral checks - OK
LEU 560(F)
9
9
1
1
Complete
Chiral checks - OK
ASN 561(F)
9
9
1
1
Complete
Chiral checks - OK
LEU 562(F)
9
9
1
1
Complete
Chiral checks - OK
PHE 563(F)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
PRO 554(F)
-
0
LYS 555(F)
-
0
ARG 556(F)
O: OXT
1
PRO 557(F)
-
0
THR 558(F)
-
0
THR 559(F)
-
0
LEU 560(F)
-
0
ASN 561(F)
-
0
LEU 562(F)
-
0
PHE 563(F)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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3D Viewers:
LIGPLOT
of interactions involving ligand PRO-LYS-ARG-PRO-THR-THR-LEU-ASN-LEU-PHE
List of
interactions
PRO 554(F) to PHE 563(F)
