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PDBsum entry 3kpp
Go to PDB code:
Ligand/metal interactions
PDB id
3kpp
Ligand highlighted
GLU-GLU-TYR-LEU-
GLN-ALA-PHE-THR-
TYR
Ligands
GLU-GLU-TYR-LEU-
GLN-ALA-PHE-THR-
TYR
GLU 1(C) to TYR 9(C)
PEG
×2
PEG 100(B)
PEG 101(B)
Ligand
GLU-GLU-TYR-LEU-GLN-ALA-PHE-THR-TYR
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLU 1(C)
10
10
1
1
Complete
Chiral checks - OK
GLU 2(C)
10
10
1
1
Complete
Chiral checks - OK
TYR 3(C)
13
13
1
1
Complete
Chiral checks - OK
LEU 4(C)
9
9
1
1
Complete
Chiral checks - OK
GLN 5(C)
10
10
1
1
Complete
Chiral checks - OK
ALA 6(C)
6
-
-
-
Residue too small to validate
PHE 7(C)
12
12
1
1
Complete
Chiral checks - OK
THR 8(C)
8
8
1
1
Complete
Chiral checks - OK
TYR 9(C)
13
13
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLU 1(C)
-
0
GLU 2(C)
-
0
TYR 3(C)
-
0
LEU 4(C)
O: OXT
1
GLN 5(C)
-
0
ALA 6(C)
-
0
PHE 7(C)
O: OXT
1
THR 8(C)
-
0
TYR 9(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLU-GLU-TYR-LEU-GLN-ALA-PHE-THR-TYR
List of
interactions
GLU 1(C) to TYR 9(C)
