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PDBsum entry 3gci
Go to PDB code:
Ligand/metal interactions
PDB id
3gci
Ligand highlighted
VAL-GLY-GLY-VAL-
VAL-ILE-ALA
Ligands
VAL-GLY-GLY-VAL-
VAL-ILE-ALA
VAL 1(P) to ALA 7(P)
Metals
_CA
CA 121(A)
Ligand
VAL-GLY-GLY-VAL-VAL-ILE-ALA
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
VAL 1(P)
8
8
1
1
Complete
Chiral checks - OK
GLY 2(P)
5
-
-
-
Residue too small to validate
GLY 3(P)
5
-
-
-
Residue too small to validate
VAL 4(P)
8
8
1
1
Complete
Chiral checks - OK
VAL 5(P)
8
8
1
1
Complete
Chiral checks - OK
ILE 6(P)
9
9
1
1
Complete
Chiral checks - OK
ALA 7(P)
6
-
-
-
Residue too small to validate
Advanced Analysis
Residue
Name Mismatches
Count
VAL 1(P)
O: OXT
1
GLY 2(P)
-
0
GLY 3(P)
-
0
VAL 4(P)
O: OXT
1
VAL 5(P)
O: OXT
1
ILE 6(P)
-
0
ALA 7(P)
-
0
Additional Information
Validation carried out using
MotiveValidator
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Validator
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3D Viewers:
Het Group ALA matches this enzyme's product fatty acid with similarity 42.86%
LIGPLOT
of interactions involving ligand VAL-GLY-GLY-VAL-VAL-ILE-ALA
List of
interactions
VAL 1(P) to ALA 7(P)
_CA
