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PDBsum entry 3eic
Go to PDB code:
Ligand/metal interactions
PDB id
3eic
6 instances of ligand highlighted
UDP
Ligands
UDP
×6
UDP 161(A)
Metals
_MG
×6
MG 160(A)
MG 162(C)
MG 165(F)
Ligand
UDP
-
Uridine-5'-Diphosphate
Formula:
C
9
H
14
N
2
O
12
P
2
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
UDP 161(A)
25
25
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
UDP 161(A)
O2A: O1A
|
O1A: O2A
|
O3B: O1B
|
O1B: O2B
4
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
Ligand matches this enzyme's product ADP with similarity 79.31%
LIGPLOT
of interactions involving ligand UDP
List of
interactions
UDP 161(A)
also representing 5 other equivalent ligands:
UDP 162(B)
UDP 163(C)
UDP 164(D)
UDP 165(E)
UDP 166(F)
_MG
×6
