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PDBsum entry 3dx7
Go to PDB code:
Ligand/metal interactions
PDB id
3dx7
Ligand highlighted
GLU-GLU-ASN-LEU-
LEU-ASP-PHE-VAL-
ARG-PHE
Ligands
GLU-GLU-ASN-LEU-
LEU-ASP-PHE-VAL-
ARG-PHE
GLU 1(C) to PHE 10(C)
ACT
×4
ACT 1428(A)
ACT 1429(A)
ACT 1357(A)
ACT 1428(B)
GOL
×2
GOL 3731(A)
GOL 3732(A)
Ligand
GLU-GLU-ASN-LEU-LEU-ASP-PHE-VAL-ARG-PHE
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLU 1(C)
10
10
1
1
Complete
Chiral checks - OK
GLU 2(C)
10
10
1
1
Complete
Chiral checks - OK
ASN 3(C)
9
9
1
1
Complete
Chiral checks - OK
LEU 4(C)
9
9
1
1
Complete
Chiral checks - OK
LEU 5(C)
9
9
1
1
Complete
Chiral checks - OK
ASP 6(C)
9
9
1
1
Complete
Chiral checks - OK
PHE 7(C)
12
12
1
1
Complete
Chiral checks - OK
VAL 8(C)
8
8
1
1
Complete
Chiral checks - OK
ARG 9(C)
12
12
1
1
Complete
Chiral checks - OK
PHE 10(C)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLU 1(C)
-
0
GLU 2(C)
-
0
ASN 3(C)
-
0
LEU 4(C)
-
0
LEU 5(C)
O: OXT
1
ASP 6(C)
-
0
PHE 7(C)
O: OXT
1
VAL 8(C)
-
0
ARG 9(C)
-
0
PHE 10(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
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Validator
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of interactions involving ligand GLU-GLU-ASN-LEU-LEU-ASP-PHE-VAL-ARG-PHE
List of
interactions
GLU 1(C) to PHE 10(C)
