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PDBsum entry 2ymd
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Ligand/metal interactions
PDB id
2ymd
10 instances of ligand highlighted
SRO
Ligands
SRO
×10
SRO 1213(A)
SRO 1212(B)
SRO 1213(C)
SRO 1214(D)
SRO 1214(F)
SRO 1213(G)
SRO 1206(H)
SRO 1213(I)
GOL
×14
GOL 1214(A)
GOL 1211(B)
GOL 1213(B)
GOL 1215(B)
GOL 1214(C)
GOL 1213(D)
GOL 1215(D)
GOL 1216(D)
GOL 1213(F)
GOL 1215(G)
GOL 1215(J)
PO4
×10
PO4 1215(A)
Ligand
SRO
-
Serotonin
[3-(2-Aminoethyl)-1h-Indol-5-Ol]
Formula:
C
10
H
12
N
2
O
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SRO 1213(A)
13
13
0
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand SRO
List of
interactions
SRO 1213(A)
also representing 2 other equivalent ligands:
SRO 1213(E)
SRO 1213(J)
