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PDBsum entry 2wid
Go to PDB code:
Ligand/metal interactions
PDB id
2wid
2 instances of ligand highlighted
NAG-NAG-FUL
Ligands
NAG-NAG-FUL
×2
NAG 1(B) to FUL 3(B)
NAG 1(D) to FUL 3(D)
NAG-FUL
NAG 1(C) to FUL 2(C)
TUN
TUN 601(A)
SO4
×3
SO4 604(A)
SO4 607(A)
SO4 608(A)
NAG
×3
NAG 614(A)
NAG 615(A)
NAG 616(A)
Metals
_CL
×5
CL 621(A)
CL 603(A)
CL 605(A)
CL 606(A)
CL 620(A)
_NA
NA 602(A)
Ligand
NAG-NAG-FUL
NAG
-
2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine]
Formula:
C
8
H
15
NO
6
FUL
-
Beta-L-Fucopyranose [Beta-L-Fucose; 6-Deoxy-Beta-L-Galactopyranose; l- Fucose; fucose; 6-Deoxy-Beta-L-Galactose]
Formula:
C
6
H
12
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
NAG 1(B)
15
15
1
1
Complete
Chiral checks - OK
NAG 2(B)
15
15
1
0
Complete
Chiral checks - OK
FUL 3(B)
11
11
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand NAG-NAG-FUL
List of
interactions
NAG 1(B) to FUL 3(B)
_CL
×5
