PDBsum entry 2oxe

Ligand/metal interactions

PDB id

2oxe


	2 instances of ligand highlighted
	NAG-NAG-MAN-MAN- MAN

Ligands

NAG-NAG-MAN-MAN-
MAN ×2

NAG 1(C) to MAN 5(C)

Metals

_CL ×5

CL 3(A)

CL 5(B)

CL 2(B)

_CA ×2

CA 600(A)

Ligand NAG-NAG-MAN-MAN-MAN

NAG - 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine] Formula: C₈H₁₅NO₆

MAN - Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose] Formula: C₆H₁₂O₆

Validation of ligand annotation

Per Residue Validation

	Atoms				Missing		Incorrect Chiral Centres
Residue	Dic.	Struc.	Link	Subs.	Atoms	Rings	Planar	High	C	Other
NAG 1(C)	15	15	1	1	Complete		Chiral checks - OK
NAG 2(C)	15	15	1	0	Complete		Chiral checks - OK
MAN 3(C)	12	12	1	0	Complete		Chiral checks - OK
MAN 4(C)	12	12	1	0	Complete		Chiral checks - OK
MAN 5(C)	12	12	1	0	Complete		Chiral checks - OK

Additional Information

Validation carried out using MotiveValidator. Full validation report can be found in Validator^DB.

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Het Group MAN matches this enzyme's product diacylglycerol with similarity 43.75%

LIGPLOT of interactions involving ligand NAG-NAG-MAN-MAN-MAN

List of
interactions

NAG 1(C) to MAN 5(C)

(also representing equivalent ligand NAG 1(D) to MAN 5(D) )