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PDBsum entry 2nqy
Go to PDB code:
Ligand/metal interactions
PDB id
2nqy
2 instances of ligand highlighted
XYP-XYP
Ligands
XYP-XYP
×2
XYP 1(C) to XYP 2(C)
XYP
×2
XYP 3001(A)
Ligand
XYP-XYP
-
Beta-D-Xylopyranose
[Beta-D-Xylose; d-Xylose; xylose]
Formula:
C
5
H
10
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
XYP 1(C)
10
9
0
0
1
0
-
-
-
-
XYP 2(C)
10
10
1
0
0
0
0
0
0
0
Advanced Analysis
Residue
Name Mismatches
Count
XYP 1(C)
C5: C1
|
C4: C2
|
C2: C4
|
C1: C5
|
O4: O2...
6
XYP 2(C)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand XYP-XYP
List of
interactions
XYP 1(C) to XYP 2(C)
(also representing equivalent ligand XYP 1(D) to XYP 2(D) )
