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PDBsum entry 2axf
Go to PDB code:
Ligand/metal interactions
PDB id
2axf
Ligand highlighted
ALA-PRO-GLN-PRO-
ALA-PRO-GLU-ASN-
ALA-TYR
Ligands
ALA-PRO-GLN-PRO-
ALA-PRO-GLU-ASN-
ALA-TYR
ALA 1(C) to TYR 10(C)
ACY
×2
ACY 1001(A)
ACY 1002(A)
Ligand
ALA-PRO-GLN-PRO-ALA-PRO-GLU-ASN-ALA-TYR
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
ALA 1(C)
6
-
-
-
Residue too small to validate
PRO 2(C)
8
8
1
1
Complete
Chiral checks - OK
GLN 3(C)
10
10
1
1
Complete
Chiral checks - OK
PRO 4(C)
8
8
1
1
Complete
Chiral checks - OK
ALA 5(C)
6
-
-
-
Residue too small to validate
PRO 6(C)
8
8
1
1
Complete
Chiral checks - OK
GLU 7(C)
10
10
1
1
Complete
Chiral checks - OK
ASN 8(C)
9
9
1
1
Complete
Chiral checks - OK
ALA 9(C)
6
-
-
-
Residue too small to validate
TYR 10(C)
13
13
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
ALA 1(C)
-
0
PRO 2(C)
-
0
GLN 3(C)
-
0
PRO 4(C)
-
0
ALA 5(C)
-
0
PRO 6(C)
-
0
GLU 7(C)
-
0
ASN 8(C)
O: OXT
1
ALA 9(C)
-
0
TYR 10(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
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Validator
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3D Viewers:
LIGPLOT
of interactions involving ligand ALA-PRO-GLN-PRO-ALA-PRO-GLU-ASN-ALA-TYR
List of
interactions
ALA 1(C) to TYR 10(C)
