Your browser does not support inline frames or is currently configured not to display inline frames. Content can be viewed at actual source page: inc/head.html
PDBsum entry 1w3t
Go to PDB code:
Ligand/metal interactions
PDB id
1w3t
4 instances of ligand highlighted
RSH-PYR-3GR
Ligands
RSH-PYR-3GR
×4
RSH 1295(A) to 3GR 1297(A)
GOL
×4
GOL 1298(A)
GOL 1298(C)
Ligand
RSH-PYR-3GR
RSH
-
3-Deoxy-D-Lyxo-Hexonic acid [D-2-Keto-3-Deoxygalactonate]
Formula:
C
6
H
12
O
6
PYR
-
Pyruvic acid
Formula:
C
3
H
43
O
3
3GR
-
D-Glyceraldehyde [Glyceraldehyde; (2r)-2,3-Dihydroxypropanal]
Formula:
C
3
H
63
O
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
RSH 1295(A)
12
12
6
0
0
0
0
0
2
0
PYR 1296(A)
6
-
-
-
-
-
-
-
-
-
3GR 1297(A)
6
-
-
-
-
-
-
-
-
-
Advanced Analysis
Residue
Name Mismatches
Count
RSH 1295(A)
C4: C1
|
O4: O1
|
C5: C2
|
O5: OT
4
PYR 1296(A)
-
0
3GR 1297(A)
-
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
Use mouse to move/zoom
3D Viewers:
Het Group RSH matches this enzyme's product pyruvate with similarity 41.67%
LIGPLOT
of interactions involving ligand RSH-PYR-3GR
List of
interactions
RSH 1295(A) to 3GR 1297(A)
also representing 3 other equivalent ligands:
RSH 1295(B) to 3GR 1297(B)
RSH 1295(C) to 3GR 1297(C)
RSH 1295(D) to 3GR 1297(D)
