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PDBsum entry 1v6k
Go to PDB code:
Ligand/metal interactions
PDB id
1v6k
4 instances of ligand highlighted
GLC-GAL
Ligands
GLC-GAL
×4
GLC 1(E) to GAL 2(E)
Metals
_MN
×4
MN 234(A)
_CA
×4
CA 233(A)
Ligand
GLC-GAL
GLC
-
Alpha-D-Glucopyranose [Alpha-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLC 1(E)
12
12
0
0
Complete
Chiral checks - OK
GAL 2(E)
12
12
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLC-GAL
List of
interactions
GLC 1(E) to GAL 2(E)
also representing 3 other equivalent ligands:
GLC 1(F) to GAL 2(F)
GLC 1(G) to GAL 2(G)
GLC 1(H) to GAL 2(H)
_MN
×4
_CA
×4
