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PDBsum entry 1rk0
Go to PDB code:
Ligand/metal interactions
PDB id
1rk0
Ligand highlighted
SER-SER-ILE-GLU-
PHE-ALA-ARG-LEU
Ligands
SER-SER-ILE-GLU-
PHE-ALA-ARG-LEU
SER 1(P) to LEU 8(P)
NAG
NAG 801(A)
Ligand
SER-SER-ILE-GLU-PHE-ALA-ARG-LEU
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
SER 1(P)
7
6
0
0
1
0
-
-
-
-
SER 2(P)
7
6
0
0
1
0
-
-
-
-
ILE 3(P)
9
9
1
1
0
0
0
0
0
0
GLU 4(P)
10
10
1
1
0
0
0
0
0
0
PHE 5(P)
12
12
1
1
0
0
0
0
0
0
ALA 6(P)
6
-
-
-
-
-
-
-
-
-
ARG 7(P)
12
12
1
1
0
0
0
0
0
0
LEU 8(P)
9
9
0
0
0
0
0
0
0
0
Advanced Analysis
Residue
Name Mismatches
Count
SER 1(P)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
SER 2(P)
CB: C
|
C: CB
|
O: OG
|
OG: OXT
4
ILE 3(P)
-
0
GLU 4(P)
O: OXT
1
PHE 5(P)
O: OXT
1
ALA 6(P)
-
0
ARG 7(P)
-
0
LEU 8(P)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Nothing to show in
Validator
DB
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of interactions involving ligand SER-SER-ILE-GLU-PHE-ALA-ARG-LEU
List of
interactions
SER 1(P) to LEU 8(P)
