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PDBsum entry 1qfo
Go to PDB code:
Ligand/metal interactions
PDB id
1qfo
2 instances of ligand highlighted
GLC-GAL-SIA
Ligands
GLC-GAL-SIA
×2
GLC 1(D) to SIA 3(D)
SIA
SIA 201(C)
Ligand
GLC-GAL-SIA
GLC
-
Alpha-D-Glucopyranose [Alpha-D-Glucose; d-Glucose; glucose]
Formula:
C
6
H
12
O
6
GAL
-
Beta-D-Galactopyranose [Beta-D-Galactose; d-Galactose; galactose]
Formula:
C
6
H
12
O
6
SIA
-
N-Acetyl-Alpha-Neuraminic acid [N-Acetylneuraminic acid; sialic acid; alpha-Sialic acid; o-Sialic acid]
Formula:
C
11
H
9
NO
9
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLC 1(D)
12
12
0
0
0
0
0
0
1
0
GAL 2(D)
12
12
1
0
0
0
0
0
0
0
SIA 3(D)
21
21
1
0
0
0
0
0
0
0
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLC-GAL-SIA
List of
interactions
GLC 1(D) to SIA 3(D)
(also representing equivalent ligand GLC 1(E) to SIA 3(E) )
