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PDBsum entry 1mox

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Ligand/metal interactions PDB id
1mox
Ligand highlighted
NAG-NAG-FUC
Ligands
NAG-NAG-FUC
NAG 1(E) to FUC 3(E)
NAG-NAG-BMA-MAN
NAG 1(F) to MAN 4(F)
NAG-NAG-BMA-FUC
NAG 1(G) to FUC 4(G)
NAG-NAG
NAG 1(H) to NAG 2(H)
NAG
NAG 630(B)
Metals
_CL ×4
CL 739(A)
CL 738(B)
CL 736(A)
CL 737(A)
_CD ×11
CD 728(C)
CD 729(D)
CD 721(A)
CD 722(A)
CD 730(A)
CD 731(A)
CD 723(B)
CD 726(B)
CD 727(B)
_PT ×7
PT 711(A)
PT 716(A)
PT 719(A)
PT 702(B)
PT 714(B)
  
Ligand NAG-NAG-FUC

NAG - 2-Acetamido-2-Deoxy-Beta-D-Glucopyranose [N-Acetyl-Beta-D-Glucosamine; 2-Acetamido-2-Deoxy-Beta- D-Glucose; 2-Acetamido-2-Deoxy-D-Glucose; 2-Acetamido- 2-Deoxy-Glucose; n-Acetyl-D-Glucosamine] Formula: C8H15NO6
FUC - Alpha-L-Fucopyranose [Alpha-L-Fucose; 6-Deoxy-Alpha-L-Galactopyranose; l- Fucose; fucose] Formula: C6H12O5
Validation of ligand annotation
Per Residue Validation
Atoms Missing Incorrect Chiral Centres
Residue Dic. Struc. Link Subs. Atoms Rings Planar High C Other
NAG 1(E) 15 15 1 1 Complete Chiral checks - OK
NAG 2(E) 15 15 1 0 Complete Chiral checks - OK
FUC 3(E) 11 11 1 0 Complete Chiral checks - OK
Additional Information
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Het Group NAG matches this enzyme's reactant [protein]-L-tyrosine with similarity 47.62%


LIGPLOT of interactions involving ligand NAG-NAG-FUC

JSmol




List of
interactions
 


NAG 1(E) to FUC 3(E)
  
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