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PDBsum entry 1mfc
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Ligand/metal interactions
PDB id
1mfc
Ligand highlighted
RAM-MAN-GLA-ABE
Ligands
RAM-MAN-GLA-ABE
RAM 1(A) to ABE 4(A)
Ligand
RAM-MAN-GLA-ABE
RAM
-
Alpha-L-Rhamnopyranose [Alpha-L-Rhamnose; 6-Deoxy-Alpha-L-Mannopyranose; l- Rhamnose; rhamnose]
Formula:
C
6
H
12
O
5
MAN
-
Alpha-D-Mannopyranose [Alpha-D-Mannose; d-Mannose; mannose]
Formula:
C
6
H
12
O
6
GLA
-
Alpha-D-Galactopyranose [Alpha-D-Galactose; d-Galactose; galactose; alpha d- Galactose]
Formula:
C
6
H
12
O
6
ABE
-
Alpha-D-Abequopyranose [Alpha-D-Abequose; 3,6-Dideoxy-Alpha-D-Xylo- Hexopyranose; 3,6-Dideoxy-Alpha-D-Gulopyranose; 3,6- Dideoxy-Alpha-D-Galactopyranose; 3-Deoxy-Alpha-D- Fucopyranose; d-Abequose; abequose]
Formula:
C
6
H
12
O
4
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
RAM 1(A)
11
11
0
0
Complete
Chiral checks - OK
MAN 2(A)
12
12
1
0
Complete
Chiral checks - OK
GLA 3(A)
12
12
1
0
Complete
Chiral checks - OK
ABE 4(A)
10
10
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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LIGPLOT
of interactions involving ligand RAM-MAN-GLA-ABE
List of
interactions
RAM 1(A) to ABE 4(A)
