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PDBsum entry 1m7d
Go to PDB code:
Ligand/metal interactions
PDB id
1m7d
Ligand highlighted
MAG-RAE-RAM
Ligands
MAG-RAE-RAM
MAG 1(C) to RAM 3(C)
Ligand
MAG-RAE-RAM
MAG
-
Methyl 2-Acetamido-2-Deoxy-Beta-D-Glucopyranoside [Beta-Methyl-N-Acetyl-D-Glucosamine; methyl 2-Acetamido- 2-Deoxy-Beta-D-Glucoside; methyl 2-Acetamido-2-Deoxy- D-Glucoside; methyl 2-Acetamido-2-Deoxy-Glucoside]
Formula:
C
9
H
17
NO
6
RAE
-
Alpha-L-Olivopyranose [Alpha-L-Olivose; 2,6-Dideoxy-Alpha-L-Arabino- Hexopyranose; 2,6-Dideoxy-Alpha-L-Glucopyranose; 2,6- Dideoxy-Alpha-L-Mannopyranose; 2-Deoxy-Alpha-L- Quinovopyranose; 2-Deoxy-Alpha-L-Rhamnoopyranose; l- Olivose; olivose; 2-Deoxy-Alpha-Rhamnose]
Formula:
C
6
H
12
O
4
RAM
-
Alpha-L-Rhamnopyranose [Alpha-L-Rhamnose; 6-Deoxy-Alpha-L-Mannopyranose; l- Rhamnose; rhamnose]
Formula:
C
6
H
12
O
5
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
MAG 1(C)
16
16
0
0
Complete
Chiral checks - OK
RAE 2(C)
10
10
1
0
Complete
Chiral checks - OK
RAM 3(C)
11
11
1
0
Complete
Chiral checks - OK
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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of interactions involving ligand MAG-RAE-RAM
List of
interactions
MAG 1(C) to RAM 3(C)
