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PDBsum entry 1m4h
Go to PDB code:
Ligand/metal interactions
PDB id
1m4h
2 instances of ligand highlighted
GLU-LEU-ASP-1OL-
VAL-GLU-PHE
Ligands
GLU-LEU-ASP-1OL-
VAL-GLU-PHE
×2
GLU 1(C) to PHE 7(C)
Ligand
GLU-LEU-ASP-1OL-VAL-GLU-PHE
-
(2r,4s,5s)-5-Amino-4-Hydroxy-2,7-Dimethyloctanoic acid
[LeuAla]
Formula:
C
10
HNO
3
Validation of ligand annotation
Per Residue Validation
Atoms
Missing
Incorrect Chiral Centres
Residue
Dic.
Struc.
Link
Subs.
Atoms
Rings
Planar
High
C
Other
GLU 1(C)
10
10
1
1
Complete
Chiral checks - OK
LEU 2(C)
9
9
1
1
Complete
Chiral checks - OK
ASP 3(C)
9
9
1
1
Complete
Chiral checks - OK
1OL 4(C)
14
14
1
1
Complete
Chiral checks - OK
VAL 5(C)
8
8
1
1
Complete
Chiral checks - OK
GLU 6(C)
10
10
1
1
Complete
Chiral checks - OK
PHE 7(C)
12
12
0
0
Complete
Chiral checks - OK
Advanced Analysis
Residue
Name Mismatches
Count
GLU 1(C)
-
0
LEU 2(C)
O: OXT
1
ASP 3(C)
-
0
1OL 4(C)
-
0
VAL 5(C)
-
0
GLU 6(C)
-
0
PHE 7(C)
OXT: O
|
O: OXT
2
Additional Information
Validation carried out using
MotiveValidator
. Full validation report can be found in
Validator
DB
.
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3D Viewers:
LIGPLOT
of interactions involving ligand GLU-LEU-ASP-1OL-VAL-GLU-PHE
List of
interactions
GLU 1(C) to PHE 7(C)
(also representing equivalent ligand GLU 1(D) to PHE 7(D) )
